Hello Muzaffar Soogun,
Thanks for your question.
I will be answering your questions.
1stly: Entra Connect can synchronize multiple on-premises AD forests/domains to a single Entra tenant. See: https://learn.microsoft.com/en-us/entra/identity/hybrid/connect/plan-connect-topologies#multiple-forests-single-microsoft-entra-tenant
Third-party applications can still interact with and make changes to Entra ID. You can also use HR systems. See: https://learn.microsoft.com/en-us/entra/identity/app-provisioning/plan-cloud-hr-provision?source=recommendations
I will recommend you read more about the answers above, as they are complex systems that require careful planninf for implementation.
You can mark it 'Accept Answer' and 'Upvote' if this helped you
Regards,
Abiola