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Hi Paul Harris,
Welcome to Microsoft Q&A Forum! Have a good day and I hope you're doing well!
Thanks for your update. If there are no delegates, no visible rules, and the item isn't in Junk/Deleted, that is indeed very strange. Since the client-side checks are clean, we need to rely on the server logs to see exactly what happened to that message during transit.
Could you please run a Message Trace in the Exchange Admin Center for one of the specific meeting invites that "disappeared"?
Once you have the trace results, please drill down into the Message events / Details section to check two specific things:
Delivery Status & Location: Does the status confirm "Delivered"? If so, does the trace specify the target folder (e.g., Inbox, Calendar, or Conversation History)?
Processing Events: Look for any "SET" or "MOVE" events right before delivery. Sometimes a hidden/corrupted inbox rule or a transport rule can move the message to the calendar or delete the notification silently, even if it doesn't appear in the Outlook rules list.
This trace will definitively tell us if the email reached the Inbox and was moved, or if it was intercepted/dropped before it ever landed.
For more details on how to interpret the trace results, you can refer to the Microsoft documentation here: Message trace in the new Exchange admin center in Exchange Online
I hope this helps narrow down the cause, at least partially. Let us know what the delivery path looks like. If I was unclear on any step or if I’ve misunderstood anything, please feel free to reach out anytime.
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