Hi @Teng,
Per my investigation, it looks like an issue specific to Microsoft Edge, as Chrome only has 1 entry for PWA. I suggest sending feedback to report this issue to Dev Team by pressing Alt+Shift+I in Microsoft Edge.
So far, we can't remove the second entry. The workaround is to not use the "Open with" option, but use the default handler. By default, it won't cause the issue of not loading the file.
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Best Regards,
Shijie Li