The Nexus version: link shows a couple detections as a "Hacktool".
"HackTool" and "RiskTool" detections do not mean the file is always bad...in some cases the these detections are related to legitimate programs which can be misused by others for nefarious purposes.
The Github version link only shows one detection. That indicates the detection could be a false positive.
The consensus among most experts is that if 90%+ of the results of an online file analysis (VirusTotal, Jotti's virusscan, MetaDefender, Hybrid-Analysis, etc) indicate a file submission is clean, then you can disregard the other detection(s) as a false positive...especially if the detection is more generic, suspicious, potentially unwanted (PUPs) and/or was made by any of the lesser known security vendors. This is typically due to the security program's heuristic analysis engine which provides the ability to detect possible new variants of malware. For a more detailed explanation, see my comments in this topic (Post #18)
I would contact the program developer, advise them of the detection and ask what they have to say about it.