@Khushboo Kumari, Thanks for posting in Q&A. Based on my researching, I find Supported application formats in Windows 365 are .IntuneWin, MSI, MSIX, AppX and Office.
https://learn.microsoft.com/en-us/windows-365/enterprise/app-overview
You can check if these applications have silent install command without user interaction. If yes, you can consider deploy them via Intune win32 app. Here is a link with more details for the reference:
https://learn.microsoft.com/en-us/mem/intune/apps/apps-win32-add
Hope the above information can help.
If the answer is helpful, please click "Accept Answer" and kindly upvote it. If you have extra questions about this answer, please click "Comment".
Note: Please follow the steps in our documentation to enable e-mail notifications if you want to receive the related email notification for this thread.