A family of Microsoft on-premises document management and storage systems.
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Since you've already tested both a shared app registration and separate app registrations, the next step is to verify the OneDrive client-side OIDC configuration. The sync client relies on both the SharePoint-side OIDC configuration and client-side settings used during authentication.
I would suggest checking the following:
- Verify the configured
SharePointOnPremFrontDoorUrlvalue and ensure authentication requests for both My Sites and the second web application are handled correctly. - Confirm the
SharePointOnPremApplicationIdUrivalue configured on the client and how it relates to the Application ID URI(s) used by your OIDC configuration. - If you're using separate Entra ID app registrations, verify that any required SharePoint-side configuration (such as ScopedClientIdentifier mappings, if supported by your SPSE build) has been completed.
- Review the OneDrive client logs located at:
%localappdata%\Microsoft\OneDrive\logsLook for authentication, audience validation, token acquisition, site discovery, or redirect URI-related errors.
I hope this helps.
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