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Onco Phenotype patient info

  • Article

The Onco Phenotype currently can receive patient information in the form of unstructured clinical notes. The payload should contain a patients section with one or more objects where the data property contains one or more JSON object of kind "note".

Example request

In this example, the Onco Phenotype model receives patient information in the form of unstructured clinical notes.

{
  "configuration": {
    "checkForCancerCase": true,
    "includeEvidence": false
  },
  "patients": [
    {
      "id": "patient1",
      "data": [
        {
          "kind": "note",
          "clinicalType": "pathology",
          "id": "document1",
          "language": "en",
          "createdDateTime": "2022-01-01T00:00:00",
          "content": {
            "sourceType": "inline",
            "value": "Laterality:  Left \n   Tumor type present:  Invasive duct carcinoma; duct carcinoma in situ \n   Tumor site:  Upper inner quadrant \n   Invasive carcinoma \n   Histologic type:  Ductal \n   Size of invasive component:  0.9 cm \n   Histologic Grade - Nottingham combined histologic score:  1 out of 3 \n   In situ carcinoma (DCIS) \n   Histologic type of DCIS:  Cribriform and solid \n   Necrosis in DCIS:  Yes \n   DCIS component of invasive carcinoma:  Extensive \n"
          }
        }
      ]
    }
  ]
}

Next steps

To get started using the Onco Phenotype model:

Deploy the service via the portal